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Imaging data sets (artificial intelligence)

Changed by Andrew Murphy, 7 May 2019
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The aggregation of an imaging data set is a critical step in building artificial intelligence (AI) for radiology. Imaging data sets are used in various ways including training and/or testing algorithms. Many data sets for building convolutional neural networks for image identification involve at least thousands of images but smaller data sets are useful for texture analysis, transfer learning, and other programs. 

While many commercial AI products are built on proprietary data sets or specific hospital data sets not available due to concerns over patient privacy. There are several imaging data sets of radiological images and/or reports publicly available at the following websites:

(The

  • UCLH Stroke EIT Dataset - Radiology Data is at https://zenodo.org/record/1199398#.XL2uNOgzZPY).

    • Additionally, The Cancer Imaging Archive: https://wiki.cancerimagingarchive.net/ contains contains links to many open radiology data sets including the following:

    • -<a title="ACR Data Science" href="https://www.acrdsi.org/DSI-Services/Dataset-Directory">ACR Data Science</a>: list of ~20 data sets</li>
    • -<li>The Medical Image Bank of Valencia: http://bimcv.cipf.es/</li>
    • -<li>MD.ai: https://public.md.ai/hub/projects/public</li>
    • -<li>OpenI - The Open Access Biomedical Image Search Engine: https://openi.nlm.nih.gov/</li>
    • -<li>OpenNeuro: https://openneuro.org/</li>
    • -<li>OASIS: http://oasis-brains.org/</li>
    • -<li>Spineweb: http://spineweb.digitalimaginggroup.ca/spineweb/index.php?n=Main.Datasets</li>
    • -<li>Zenodo: https://zenodo.org/</li>
    • -</ul><p>(The UCLH Stroke EIT Dataset - Radiology Data is at https://zenodo.org/record/1199398#.XL2uNOgzZPY).</p><p>Additionally The Cancer Imaging Archive: https://wiki.cancerimagingarchive.net/ contains links to many open radiology data sets including the following:</p><ul>
    • -<li>4D-Lung</li>
    • -<li>ACRIN-FLT-Breast</li>
    • -<li>ACRIN-FMISO-Brain</li>
    • -<li>ACRIN-NSCLC-FDG-PET</li>
    • -<li>Anti-PD-1 Immunotherapy Lung (Anti-PD-1_Lung)</li>
    • -<li>Anti-PD-1 Immunotherapy Melanoma (Anti-PD-1_MELANOMA)</li>
    • -<li>APOLLO-1-VA</li>
    • -<li>APOLLO2</li>
    • -<li>Brain-Tumor-Progression</li>
    • -<li>BREAST-DIAGNOSIS</li>
    • -<li>Breast-MRI-NACT-Pilot</li>
    • -<li>CBIS-DDSM</li>
    • -<li>CPTAC-CCRCC</li>
    • -<li>CPTAC-CM</li>
    • -<li>CPTAC-GBM</li>
    • -<li>CPTAC-HNSCC</li>
    • -<li>CPTAC-LSCC</li>
    • -<li>CPTAC-LUAD</li>
    • -<li>CPTAC-PDA</li>
    • -<li>CPTAC-SAR</li>
    • -<li>CPTAC-UCEC</li>
    • -<li>Credence Cartridge Radiomics Phantom CT Scans</li>
    • -<li>Credence Cartridge Radiomics Phantom CT Scans with Controlled Scanning Approach (CC-Radiomics-Phantom-2)</li>
    • -<li>CT COLONOGRAPHY</li>
    • -<li>CT Lymph Nodes</li>
    • -<li>Head-and-neck squamous cell carcinoma patients with CT taken during pre-treatment, mid-treatment, and post-treatment (HNSCC-3DCT-RT)</li>
    • -<li>Head-Neck Cetuximab</li>
    • -<li>Head-Neck-PET-CT</li>
    • -<li>ISPY1</li>
    • -<li>Ivy GAP</li>
    • -<li>LGG-1p19qDeletion</li>
    • -<li>LIDC-IDRI</li>
    • -<li>LungCT-Diagnosis</li>
    • -<li>Lung CT Segmentation Challenge 2017</li>
    • -<li>Lung Phantom</li>
    • -<li>Mouse-Astrocytoma</li>
    • -<li>Mouse-Mammary</li>
    • -<li>NaF Prostate</li>
    • -<li>NRG-1308</li>
    • -<li>NSCLC-Cetuximab</li>
    • -<li>NSCLC Radiogenomics</li>
    • -<li>NSCLC-Radiomics</li>
    • -<li>NSCLC-Radiomics-Genomics</li>
    • -<li>Osteosarcoma data from UT Southwestern/UT Dallas for Viable and Necrotic Tumor Assessment</li>
    • -<li>Pancreas-CT</li>
    • -<li>Phantom FDA</li>
    • -<li>Prostate-3T</li>
    • -<li>PROSTATE-DIAGNOSIS</li>
    • -<li>Prostate Fused-MRI-Pathology</li>
    • -<li>PROSTATE-MRI</li>
    • -<li>QIBA CT-1C</li>
    • -<li>QIN-BRAIN-DSC-MRI</li>
    • -<li>QIN-Breast</li>
    • -<li>QIN Breast DCE-MRI</li>
    • -<li>QIN GBM Treatment Response</li>
    • -<li>QIN-HEADNECK</li>
    • -<li>QIN LUNG CT</li>
    • -<li>QIN PET Phantom</li>
    • -<li>QIN PROSTATE</li>
    • -<li>QIN-PROSTATE-Repeatability</li>
    • -<li>QIN-SARCOMA</li>
    • -<li>Quantitative Imaging Network Collections</li>
    • -<li>REMBRANDT</li>
    • -<li>RIDER Breast MRI</li>
    • -<li>RIDER Collections</li>
    • -<li>RIDER Lung CT</li>
    • -<li>RIDER Lung PET-CT</li>
    • -<li>RIDER NEURO MRI</li>
    • -<li>RIDER PHANTOM MRI</li>
    • -<li>RIDER Phantom PET-CT</li>
    • -<li>Soft-tissue-Sarcoma</li>
    • -<li>SPIE-AAPM Lung CT Challenge</li>
    • -<li>SPIE-AAPM-NCI PROSTATEx Challenges</li>
    • -<li>Synthetic and Phantom MR Images for Determining Deformable Image Registration Accuracy (MRI-DIR)</li>
    • -<li>TCGA-BLCA</li>
    • -<li>TCGA-BRCA</li>
    • -<li>TCGA-CESC</li>
    • -<li>TCGA-COAD</li>
    • -<li>TCGA-ESCA</li>
    • -<li>TCGA-GBM</li>
    • -<li>TCGA-HNSC</li>
    • -<li>TCGA-KICH</li>
    • -<li>TCGA-KIRC</li>
    • -<li>TCGA-KIRP</li>
    • -<li>TCGA-LGG</li>
    • -<li>TCGA-LIHC</li>
    • -<li>TCGA-LUAD</li>
    • -<li>TCGA-LUSC</li>
    • -<li>TCGA-OV</li>
    • -<li>TCGA-PRAD</li>
    • -<li>TCGA-READ</li>
    • -<li>TCGA-SARC</li>
    • -<li>TCGA-STAD</li>
    • -<li>TCGA-THCA and</li>
    • -<li>TCGA-UCEC</li>
    • +<a href="https://www.acrdsi.org/DSI-Services/Dataset-Directory">ACR Data Science</a>: list of ~20 data sets</li>
    • +<li><a href="http://bimcv.cipf.es/">The Medical Image Bank of Valencia</a></li>
    • +<li>
    • +<a href="https://public.md.ai/hub/projects/public">MD.ai</a>: a collection of public projects</li>
    • +<li>
    • +<a href="https://openi.nlm.nih.gov/">OpenI - The Open Access Biomedical Image Search Engine</a>: data sets search engine </li>
    • +<li>
    • +<a href="https://openneuro.org/">OpenNeuro</a>: list of over 200 neuro data sets</li>
    • +<li>
    • +<a href="http://oasis-brains.org/">OASIS</a>: open access neuro data sets</li>
    • +<li>
    • +<a href="http://spineweb.digitalimaginggroup.ca/spineweb/index.php?n=Main.Datasets">Spineweb</a> 16 spinal imaging data sets</li>
    • +<li>
    • +<a href="https://zenodo.org/">Zenodo</a> searchable projects</li>
    • +<li><a href="https://zenodo.org/record/1199398#.XL2uNOgzZPY">UCLH Stroke EIT Dataset</a></li>
    • +</ul><p>Additionally, <a href="https://wiki.cancerimagingarchive.net/">The Cancer Imaging Archive</a> contains links to many open radiology data sets including the following:</p><ul>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/4D-Lung">4D-Lung</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/ACRIN-FLT-Breast">ACRIN-FLT-Breast</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/ACRIN-FLT-Breast">ACRIN-FLT-Breast</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/ACRIN-FMISO-Brain">ACRIN-FMISO-Brain</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/ACRIN-NSCLC-FDG-PET">ACRIN-NSCLC-FDG-PET</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=41517500">Anti-PD-1 Immunotherapy Lung (Anti-PD-1_Lung)</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=37225348">Anti-PD-1 Immunotherapy Melanoma (Anti-PD-1_MELANOMA)</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/APOLLO-1-VA">APOLLO-1-VA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/APOLLO2">APOLLO2</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Brain-Tumor-Progression">Brain-Tumor-Progression</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/BREAST-DIAGNOSIS">BREAST-DIAGNOSIS</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Breast-MRI-NACT-Pilot">Breast-MRI-NACT-Pilot</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CBIS-DDSM">CBIS-DDSM</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-AML">CPTAC-AML</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-CCRCC">CPTAC-CCRCC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-CM">CPTAC-CM</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-GBM">CPTAC-GBM</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-HNSCC">CPTAC-HNSCC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-LSCC">CPTAC-LSCC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-LUAD">CPTAC-LUAD</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-PDA">CPTAC-PDA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-SAR">CPTAC-SAR</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CPTAC-UCEC">CPTAC-UCEC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Credence+Cartridge+Radiomics+Phantom+CT+Scans">Credence Cartridge Radiomics Phantom CT Scans</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=39879218">Credence Cartridge Radiomics Phantom CT Scans with Controlled Scanning Approach (CC-Radiomics-Phantom-2)</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CT+COLONOGRAPHY">CT COLONOGRAPHY</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/CT+Lymph+Nodes">CT Lymph Nodes</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=39879146">Head-and-neck squamous cell carcinoma patients with CT taken during pre-treatment, mid-treatment, and post-treatment (HNSCC-3DCT-RT)</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Head-Neck+Cetuximab">Head-Neck Cetuximab</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Head-Neck-PET-CT">Head-Neck-PET-CT</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/ISPY1">ISPY1</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Ivy+GAP">Ivy GAP</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/LGG-1p19qDeletion">LGG-1p19qDeletion</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/LIDC-IDRI">LIDC-IDRI</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/LungCT-Diagnosis">LungCT-Diagnosis</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Lung+CT+Segmentation+Challenge+2017">Lung CT Segmentation Challenge 2017</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Lung+Phantom">Lung Phantom</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Mouse-Astrocytoma">Mouse-Astrocytoma</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Mouse-Mammary">Mouse-Mammary</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/NaF+Prostate">NaF Prostate</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/NRG-1308">NRG-1308</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/NSCLC-Cetuximab">NSCLC-Cetuximab</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/NSCLC+Radiogenomics">NSCLC Radiogenomics</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/NSCLC-Radiomics">NSCLC-Radiomics</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/NSCLC-Radiomics-Genomics">NSCLC-Radiomics-Genomics</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=52756935">Osteosarcoma data from UT Southwestern/UT Dallas for Viable and Necrotic Tumor Assessment</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Pancreas-CT">Pancreas-CT</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Phantom+FDA">Phantom FDA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Prostate-3T">Prostate-3T</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/PROSTATE-DIAGNOSIS">PROSTATE-DIAGNOSIS</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Prostate+Fused-MRI-Pathology">Prostate Fused-MRI-Pathology</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/PROSTATE-MRI">PROSTATE-MRI</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIBA+CT-1C">QIBA CT-1C</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN-BRAIN-DSC-MRI">QIN-BRAIN-DSC-MRI</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN-Breast">QIN-Breast</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN+Breast+DCE-MRI">QIN Breast DCE-MRI</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN+GBM+Treatment+Response">QIN GBM Treatment Response</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN-HEADNECK">QIN-HEADNECK</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN+LUNG+CT">QIN LUNG CT</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN+PET+Phantom">QIN PET Phantom</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN+PROSTATE">QIN PROSTATE</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN-PROSTATE-Repeatability">QIN-PROSTATE-Repeatability</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/QIN-SARCOMA">QIN-SARCOMA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Quantitative+Imaging+Network+Collections">Quantitative Imaging Network Collections</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/REMBRANDT">REMBRANDT</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/RIDER+Breast+MRI">RIDER Breast MRI</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/RIDER+Collections">RIDER Collections</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/RIDER+Lung+CT">RIDER Lung CT</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/RIDER+Lung+PET-CT">RIDER Lung PET-CT</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/RIDER+NEURO+MRI">RIDER NEURO MRI</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/RIDER+PHANTOM+MRI">RIDER PHANTOM MRI</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/RIDER+Phantom+PET-CT">RIDER Phantom PET-CT</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/Soft-tissue-Sarcoma">Soft-tissue-Sarcoma</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/SPIE-AAPM+Lung+CT+Challenge">SPIE-AAPM Lung CT Challenge</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/SPIE-AAPM-NCI+PROSTATEx+Challenges">SPIE-AAPM-NCI PROSTATEx Challenges</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/pages/viewpage.action?pageId=37224702">Synthetic and Phantom MR Images for Determining Deformable Image Registration Accuracy (MRI-DIR)</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-BLCA">TCGA-BLCA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-BRCA">TCGA-BRCA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-CESC">TCGA-CESC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-COAD">TCGA-COAD</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-ESCA">TCGA-ESCA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-GBM">TCGA-GBM</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-HNSC">TCGA-HNSC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-KICH">TCGA-KICH</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-KIRC">TCGA-KIRC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-KIRP">TCGA-KIRP</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-LGG">TCGA-LGG</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-LIHC">TCGA-LIHC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-LUAD">TCGA-LUAD</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-LUSC">TCGA-LUSC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-OV">TCGA-OV</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-PRAD">TCGA-PRAD</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-READ">TCGA-READ</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-SARC">TCGA-SARC</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-STAD">TCGA-STAD</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-THCA">TCGA-THCA</a></li>
    • +<li><a href="https://wiki.cancerimagingarchive.net/display/Public/TCGA-UCEC">TCGA-UCEC</a></li>

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